Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_73880843_73882090_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73880843 - 73882090

Intron Length:

1248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

ATGTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

EILKTTCFICGLERDKFDNK

Intron Amino Acid Position:

2564

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

27.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.8

0.74

0.9

77.3

36.3

Minor 5ss

38.8

-1.3

3.4

43.6

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

ITPR2

Ensembl Gene ID:

ENSAPLG00000014956

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015781

73637633 - 73906738

269106