Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_74303784_74303819_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

74303784 - 74303819

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGTCCATA

5'SS Class:

weak_minor

3'SS Sequence:

AGTGGTGTGAGAG|A

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

TGTCCAT

U12 Branch Point Sequence:

GTGTCCATAGGA

Flanking Amino Acid:

QTNSDVKMGTTVWMALMKQT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

48.1

-0.1

1.2

41.4

Major BPS

62.1

0.3

1.4

72.5

43.5

Major PPT

-0.3

1.8

41.9

46.9

Minor 5ss

57.3

0.25

2.4

41.2

Minor BPS

46.9

-0.2

2.1

61.15

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028893

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034324

74303691 - 74304988

1298