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Intron Name: Anas_platyrhynchos_platyrhynchos_1_74416286_74419117_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74416286 - 74419117

Intron Length:

2832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAATGTT

5'SS Class:

major

3'SS Sequence:

TAATGTCTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

GGTACTTTACCT

Flanking Amino Acid:

VVEKGQQVLNLIEKLQFFLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

80.6

31.7

Major BPS

0.72

78.4

31.2

Major PPT

71.8

0.49

0.9

62.9

43.6

Minor 5ss

40.4

-1.1

3.5

62.1

42.9

Minor BPS

59.4

0.37

1.7

74.27

42.3

Associated Gene:

Gene:

CASC1

Ensembl Gene ID:

ENSAPLG00000015977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016677

74413632 - 74431203

17572