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Intron Name: Anas_platyrhynchos_platyrhynchos_1_74427370_74428098_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

74427370 - 74428098

Intron Length:

729

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCAACT

5'SS Class:

major

3'SS Sequence:

ATCCCCTGTAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

TCTTTTTGCATC

Flanking Amino Acid:

EPVIARWDPAGQQWRTDGIS

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.2

69.2

41.5

Major BPS

75.1

0.62

65.6

Major PPT

59.5

0.22

1.1

59.2

35.4

Minor 5ss

40.6

-1.1

3.2

59.4

44.7

Minor BPS

48.1

-0.1

1.8

61.75

38.7

Associated Gene:

Gene:

CASC1

Ensembl Gene ID:

ENSAPLG00000015977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016677

74413632 - 74431203

17572