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Intron Name: Anas_platyrhynchos_platyrhynchos_1_74429134_74429338_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74429134 - 74429338

Intron Length:

205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TATCTTCTAAGT

Flanking Amino Acid:

SYKYVSVNKKAPLTEVRAYQ

Intron Amino Acid Position:

457

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

0.62

1.4

85.7

34.9

Major PPT

0.77

0.8

77.5

35.6

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

48.9

-0

1.9

70.77

40.1

Associated Gene:

Gene:

CASC1

Ensembl Gene ID:

ENSAPLG00000015977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016677

74413632 - 74431203

17572