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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_74515039_74527241_R

Intron Information:

Intron Rank:
4
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
74515039 - 74527241
Intron Length:
12203

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAAGAGAT
5'SS Class:
strong_major
3'SS Sequence:
TGTTATTTAACAG|T
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTATAT
U12 Branch Point Sequence:
TGTTATTTAACA
Flanking Amino Acid:
SIDFYNNLDQFDIDKEAGER
Intron Amino Acid Position:
228

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
92.3
1
0.8
84.2
26.4
Major BPS
79.2
0.73
1
75.3
39.4
Major PPT
78
0.63
1
73.6
40.4
Minor 5ss
32.1
-2
3.5
46.6
48.7
Minor BPS
74.3
0.76
1.4
81.26
33.6

Associated Gene:

Gene:
GYS2
Ensembl Gene ID:
ENSAPLG00000016252
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000016992
74490212 - 74540171
49960