Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_74654256_74654634_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74654256 - 74654634

Intron Length:

379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

TTTACTTTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

AAGTCTTTTACT

Flanking Amino Acid:

EATASIDMATENILQKVVMT

Intron Amino Acid Position:

1470

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.6

77.2

32.8

Major BPS

74.2

0.6

39.4

Major PPT

75.4

0.57

73.5

36.9

Minor 5ss

36.1

-1.6

2.9

47.9

41.8

Minor BPS

63.5

0.51

1.6

75.21

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016445

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017164

74652229 - 74717682

65454