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Intron Name: Anas_platyrhynchos_platyrhynchos_1_75118323_75128619_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
75118323 - 75128619

Intron Length:
10297

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACGGGGG

5'SS Class:
major

3'SS Sequence:
TTTTACTTTTCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAC

U12 Branch Point Sequence:
TTGTTTTTACTT

Flanking Amino Acid:
HWRPEEVTLQLFTDGITNKL

Intron Amino Acid Position:
53

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.3
0.64
1.1
58.9
46

Major BPS
86.6
0.91
0.8
77.7
36.7

Major PPT
91
0.92
0.7
89
27.5

Minor 5ss
27.5
-2.6
3.6
37.8
47

Minor BPS
63.3
0.5
1.6
78.42
39.1

Associated Gene:

Gene:
ETNK1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

75118167 - 75144184
26018

75118167 - 75146544
28378