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Intron Name: Anas_platyrhynchos_platyrhynchos_1_75129821_75134452_F


Intron Information:

Intron Rank:
3

Intron Class:
major-like

Intron Phase:
2

Intron Coordinates:
75129821 - 75134452

Intron Length:
4632

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAGTTATT

5'SS Class:
major

3'SS Sequence:
TACACCTGAAAAG|G

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
TACTAAA

U12 Branch Point Sequence:
TAAAAATTAACT

Flanking Amino Acid:
TEFADEEVNKRFLSEIPSPQ

Intron Amino Acid Position:
186

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.8
0.7
1
83.7
34.8

Major BPS
77.5
0.68
0.8
76.2
24.6

Major PPT
49.3
-0
1.1
48.9
38

Minor 5ss
40.3
-1.1
3.2
59.8
44.7

Minor BPS
55.2
0.24
1.8
74.02
41.4

Associated Gene:

Gene:
ETNK1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

75118167 - 75144184
26018

75118167 - 75146544
28378