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Intron Name: Anas_platyrhynchos_platyrhynchos_1_75144916_75146471_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
75144916 - 75146471

Intron Length:
1556

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTAAGTGTA

5'SS Class:
strong_major

3'SS Sequence:
TCCATTTGAATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTAAC

U12 Branch Point Sequence:
CTGCTCTTAACT

Flanking Amino Acid:
KYSTIDFDFLGYAIVRFNQY

Intron Amino Acid Position:
340

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.8
0.89
0.9
81.5
32.7

Major BPS
77.1
0.67
1
77.9
32.2

Major PPT
64.1
0.32
1
61.3
38.8

Minor 5ss
35.8
-1.6
3.3
40.8
45.4

Minor BPS
72.9
0.8
1.3
80.77
41.2

Associated Gene:

Gene:
ETNK1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

75118167 - 75146544
28378