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Intron Name: Anas_platyrhynchos_platyrhynchos_1_75427070_75430401_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75427070 - 75430401

Intron Length:

3332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGGGAC

5'SS Class:

major

3'SS Sequence:

TTCTCCATGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCAAT

U12 Branch Point Sequence:

TGTTCTTTTACT

Flanking Amino Acid:

RQEMRQYFNVGQQAQIPIAT

Intron Amino Acid Position:

663

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

60.1

39.2

Major BPS

71.8

0.54

1.2

32.5

Major PPT

73.5

0.53

35.1

Minor 5ss

35.2

-1.7

3.5

40.4

46.2

Minor BPS

74.5

0.85

1.5

88.94

35.5

Associated Gene:

Gene:

SOX5

Ensembl Gene ID:

ENSAPLG00000003238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003302

75426766 - 75680004

253239