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Intron Name: Anas_platyrhynchos_platyrhynchos_1_75437234_75438107_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75437234 - 75438107

Intron Length:

874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTCAGTACA

5'SS Class:

major

3'SS Sequence:

TCTTTCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATGAT

U12 Branch Point Sequence:

TGAAACATAGTT

Flanking Amino Acid:

MDFNMSGDSDGSAGVSESRI

Intron Amino Acid Position:

533

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.3

73.3

37.4

Major BPS

66.9

0.42

1.3

59.7

46.7

Major PPT

89.2

0.88

0.6

88.7

20.6

Minor 5ss

31.6

-2.1

2.5

32.6

35.1

Minor BPS

43.7

-0.4

1.9

61.08

41.9

Associated Gene:

Gene:

SOX5

Ensembl Gene ID:

ENSAPLG00000003238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003302

75426766 - 75680004

253239