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Intron Name: Anas_platyrhynchos_platyrhynchos_1_75511333_75524666_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75511333 - 75524666

Intron Length:

13334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTCCT

5'SS Class:

major

3'SS Sequence:

TTCTCTTACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATTAT

U12 Branch Point Sequence:

ATTCTCTTACTT

Flanking Amino Acid:

PPGFSYKAGCSDPYPVQLIP

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

69.4

41.2

Major BPS

72.4

0.56

1.1

63.7

42.3

Major PPT

76.9

0.61

0.8

77.4

30.2

Minor 5ss

39.1

-1.2

57.4

40.4

Minor BPS

63.4

0.5

1.6

79.24

37.1

Associated Gene:

Gene:

SOX5

Ensembl Gene ID:

ENSAPLG00000003238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003302

75426766 - 75680004

253239