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Intron Name: Anas_platyrhynchos_platyrhynchos_1_75572180_75585753_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75572180 - 75585753

Intron Length:

13574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACACTC

5'SS Class:

major

3'SS Sequence:

ATATGATGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTTGTTTTCACC

Flanking Amino Acid:

MGSGNFGEIKGTPESLAEKE

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

69.9

41.1

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

62.5

0.28

1.1

45.6

Minor 5ss

42.1

-0.9

3.2

59.9

44.7

Minor BPS

58.2

0.24

1.8

72.92

38.9

Associated Gene:

Gene:

SOX5

Ensembl Gene ID:

ENSAPLG00000003238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003302

75426766 - 75680004

253239