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Intron Name: Anas_platyrhynchos_platyrhynchos_1_75585841_75645365_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75585841 - 75645365

Intron Length:

59525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

CCCCTTCACTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

ATTTGCTTACAT

Flanking Amino Acid:

MEELIKNEPEETPSIEKLLS

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.1

39.5

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

70.5

0.46

0.8

68.6

30.7

Minor 5ss

33.4

-1.9

3.4

48.4

47.3

Minor BPS

55.5

0.25

2.1

79.57

42.3

Associated Gene:

Gene:

SOX5

Ensembl Gene ID:

ENSAPLG00000003238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003302

75426766 - 75680004

253239