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Intron Name: Anas_platyrhynchos_platyrhynchos_1_76189244_76191824_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76189244 - 76191824

Intron Length:

2581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCTGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

TGTTTCTGAAAG

Flanking Amino Acid:

KGGTGDCKLGGNYGSSIYAQ

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

76.9

33.7

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

67.8

0.4

1.2

71.2

38.9

Minor 5ss

32.3

-2

2.9

32.2

42.1

Minor BPS

60.2

0.18

1.6

66.37

40.8

Associated Gene:

Gene:

BCAT1

Ensembl Gene ID:

ENSAPLG00000003259

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028439

76175388 - 76234249

58862

ENSAPLT00000028394

76174504 - 76234249

59746

ENSAPLT00000003340

76175388 - 76205282

29895