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Intron Name: Anas_platyrhynchos_platyrhynchos_1_76195062_76197158_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
76195062 - 76197158

Intron Length:
2097

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACA|GTGGGTATA

5'SS Class:
major

3'SS Sequence:
TTTGGCTTGGTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AAGTAAC

U12 Branch Point Sequence:
TAACATCCAACT

Flanking Amino Acid:
VPMLWLNEYTLFEGMKAYRG

Intron Amino Acid Position:
114

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65.3
0.36
1.1
68.2
38.6

Major BPS
57.9
0.2
1.1
59.4
34.8

Major PPT
69.4
0.44
1
66
40.8

Minor 5ss
34.7
-1.7
3.1
46.9
42.8

Minor BPS
43.9
-0.3
1.9
62.3
40.7

Associated Gene:

Gene:
BCAT1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

76175388 - 76234249
58862