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Intron Name: Anas_platyrhynchos_platyrhynchos_1_76198633_76215376_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76198633 - 76215376

Intron Length:

16744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTGT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

ATTACTTTATTT

Flanking Amino Acid:

ATKHVTESFKASDLVIIPAT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.9

80.5

Major BPS

81.8

0.79

1.1

34.5

Major PPT

86.9

0.83

0.8

85.1

34.9

Minor 5ss

-0.2

2.5

67.3

43.8

Minor BPS

0.49

1.6

78.87

37.7

Associated Gene:

Gene:

BCAT1

Ensembl Gene ID:

ENSAPLG00000003259

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028394

76174504 - 76234249

59746

ENSAPLT00000028439

76175388 - 76234249

58862