Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_76251968_76255627_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76251968 - 76255627

Intron Length:

3660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGCGCC

5'SS Class:

major

3'SS Sequence:

TTTCTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTGAT

U12 Branch Point Sequence:

ACATACTTGATT

Flanking Amino Acid:

MISLSDTQKIGMGLTGFG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.2

0.33

1.1

53.9

39.2

Major BPS

0.62

65.3

41.5

Major PPT

95.4

1.02

0.5

91.9

18.9

Minor 5ss

33.4

-1.9

3.3

38.8

40.6

Minor BPS

60.1

0.4

1.5

70.9

40.1

Associated Gene:

Gene:

GOLT1B

Ensembl Gene ID:

ENSAPLG00000003388

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003458

76245372 - 76255652

10281