Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_76266153_76267264_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76266153 - 76267264

Intron Length:

1112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACAGT

5'SS Class:

strong_major

3'SS Sequence:

CACTTTTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GCATCTTTCACT

Flanking Amino Acid:

VINGRYKGLSGIVYCFSQKD

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

75.1

41.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

76.7

0.6

0.9

72.2

37.5

Minor 5ss

40.5

-1.1

3.1

57.9

46.4

Minor BPS

60.5

0.41

1.8

73.14

43.8

Associated Gene:

Gene:

RECQL

Ensembl Gene ID:

ENSAPLG00000003404

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023520

76257735 - 76276613

18879

ENSAPLT00000003516

76257735 - 76274702

16968

ENSAPLT00000034135

76257735 - 76276613

18879