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Intron Name: Anas_platyrhynchos_platyrhynchos_1_76288658_76293096_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76288658 - 76293096

Intron Length:

4439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGGGCC

5'SS Class:

major

3'SS Sequence:

CTTATTCCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATATTTTTAAAT

Flanking Amino Acid:

GIAGVTCAEKISKTLEEFDV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

63.7

36.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.74

0.8

76.7

31.9

Minor 5ss

-3

3.4

32.8

42.4

Minor BPS

69.2

0.68

1.3

80.13

35.2

Associated Gene:

Gene:

PYROXD1

Ensembl Gene ID:

ENSAPLG00000003575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040619

76277802 - 76293177

15376