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Intron Name: Anas_platyrhynchos_platyrhynchos_1_76380112_76380728_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76380112 - 76380728

Intron Length:

617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGATGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

GCAAACTCAATT

Flanking Amino Acid:

GGCHNCSKLKIFLGALAFSF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

70.4

36.4

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

90.6

0.91

0.6

89.1

Minor 5ss

43.4

-0.7

2.8

56.4

47.7

Minor BPS

47.5

-0.1

1.7

60.06

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004396

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004541

76376117 - 76398625

22509

ENSAPLT00000043222

76377937 - 76398934

20998