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Intron Name: Anas_platyrhynchos_platyrhynchos_1_76380871_76380961_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76380871 - 76380961

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGCATA

5'SS Class:

strong_major

3'SS Sequence:

CCTGATGACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CATTTTGTAATC

Flanking Amino Acid:

VGIIDGSFELGNLMVMILVS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

79.7

35.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

60.3

0.23

53.5

40.3

Minor 5ss

-0.1

2.5

65.8

45.4

Minor BPS

49.9

-0

62.03

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004396

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043222

76377937 - 76398934

20998

ENSAPLT00000004541

76376117 - 76398625

22509