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Intron Name: Anas_platyrhynchos_platyrhynchos_1_76387824_76389162_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76387824 - 76389162

Intron Length:

1339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGTACC

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TTTTTCTTTACA

Flanking Amino Acid:

VSVARAIFLVGVILLPITIL

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

71.5

38.5

Major BPS

0.52

1.1

77.7

35.3

Major PPT

96.1

1.04

0.5

91.7

19.5

Minor 5ss

35.7

-1.6

2.9

43.1

38.2

Minor BPS

77.1

0.85

1.5

87.01

30.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004396

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043222

76377937 - 76398934

20998

ENSAPLT00000004541

76376117 - 76398625

22509