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Intron Name: Anas_platyrhynchos_platyrhynchos_1_76394821_76396265_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76394821 - 76396265

Intron Length:

1445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAAATAC

5'SS Class:

major

3'SS Sequence:

GTCTCCTTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAA

U12 Branch Point Sequence:

AATGTATTATTT

Flanking Amino Acid:

GGTPTYMIMFRSVSPDLKSF

Intron Amino Acid Position:

568

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

0.9

70.6

Major BPS

62.4

0.31

32.1

Major PPT

79.3

0.66

0.8

77.2

31.6

Minor 5ss

32.1

-2

3.1

40.8

45.7

Minor BPS

46.8

-0.1

1.9

64.09

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004396

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043222

76377937 - 76398934

20998

ENSAPLT00000004541

76376117 - 76398625

22509