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Intron Name: Anas_platyrhynchos_platyrhynchos_1_76413787_76414364_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76413787 - 76414364

Intron Length:

578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTATCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

CTGTCACTACCT

Flanking Amino Acid:

ACRLYDSNAYRYVYLGLSAL

Intron Amino Acid Position:

645

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.9

74.9

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

74.8

0.56

0.8

68.4

31.6

Minor 5ss

30.1

-2.3

3.2

37.9

46.9

Minor BPS

46.9

-0.1

2.2

69.63

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047858

76412528 - 76434727

22200

ENSAPLT00000035362

76412528 - 76434727

22200