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Intron Name: Anas_platyrhynchos_platyrhynchos_1_76418692_76419950_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

76418692 - 76419950

Intron Length:

1259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTAACTTAACAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

CTTAACTTAACA

Flanking Amino Acid:

VVAGITVSYDGKPIPYHENA

Intron Amino Acid Position:

459

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

83.2

30.8

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

54.8

0.11

1.2

54.5

43.9

Minor 5ss

33.4

-1.9

2.8

41.5

Minor BPS

69.8

0.62

1.6

77.35

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038690

76407607 - 76434727

27121

ENSAPLT00000035362

76412528 - 76434727

22200

ENSAPLT00000026316

76410239 - 76434727

24489

ENSAPLT00000004705

76407607 - 76434727

27121

ENSAPLT00000047858

76412528 - 76434727

22200