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Intron Name: Anas_platyrhynchos_platyrhynchos_1_7644643_7678425_R

Intron Information:

Intron Rank:

136407

Intron Class:

major

Intron Phase:

Intron Coordinates:

7644643 - 7678425

Intron Length:

33783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTAGTCAT

5'SS Class:

major

3'SS Sequence:

TTTGTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAGAT

U12 Branch Point Sequence:

AGATCCAAAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.2

71.8

39.4

Major BPS

66.3

0.41

37.5

Major PPT

92.4

0.95

0.7

88.3

28.9

Minor 5ss

32.4

-2

2.8

40.1

39.6

Minor BPS

51.1

0.03

1.9

64.88

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020820

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035772

7643938 - 7682670

38733