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Intron Name: Anas_platyrhynchos_platyrhynchos_1_76575908_76576789_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76575908 - 76576789

Intron Length:

882

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

ATTTCAAAAAGC

Flanking Amino Acid:

RITRLKLLLQNILKRTRPGS

Intron Amino Acid Position:

1250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

1.1

76.2

39.9

Major BPS

0.79

0.8

83.7

25.7

Major PPT

81.9

0.72

0.8

77.5

30.1

Minor 5ss

41.8

-0.9

3.2

57.8

46.8

Minor BPS

44.1

-0.4

2.3

62.96

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018325

76552175 - 76580780

28606

ENSAPLT00000002659

76557892 - 76580780

22889