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Intron Name: Anas_platyrhynchos_platyrhynchos_1_76576865_76578064_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76576865 - 76578064

Intron Length:

1200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCCA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCCTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

ATCACCTGATTT

Flanking Amino Acid:

ATQAYDALEKLIKDCNENVQ

Intron Amino Acid Position:

1275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

0.76

0.8

78.1

29.9

Minor 5ss

-2.2

3.2

39.6

45.9

Minor BPS

49.8

0.07

1.8

68.05

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018325

76552175 - 76580780

28606

ENSAPLT00000002659

76557892 - 76580780

22889