Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_76676006_76676574_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76676006 - 76676574

Intron Length:

569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCAATATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TGTGTTTCAATA

Flanking Amino Acid:

TNLLLGAVITGSSGSLLQES

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

76.9

33.7

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

77.4

0.62

0.9

74.7

Minor 5ss

31.4

-2.1

3.1

39.2

46.2

Minor BPS

52.3

0.07

1.6

63.32

37.7

Associated Gene:

Gene:

VWF

Ensembl Gene ID:

ENSAPLG00000002805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045676

76675951 - 76824914

148964

ENSAPLT00000002949

76675951 - 76824887

148937