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Intron Name: Anas_platyrhynchos_platyrhynchos_1_76688382_76696245_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
76688382 - 76696245

Intron Length:
7864

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTGGTGCC

5'SS Class:
major

3'SS Sequence:
ACTGGTCATGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTAAAAT

U12 Branch Point Sequence:
CCTCCTTGCACT

Flanking Amino Acid:
CNISSDIAEKGVMEICQLLR

Intron Amino Acid Position:
218

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.8
0.54
1.2
68.2
38.6

Major BPS
58.2
0.21
1.2
65.3
36.8

Major PPT
66.4
0.37
1
58.8
41.6

Minor 5ss
28.9
-2.4
3.1
36.3
40.7

Minor BPS
48
-0
1.9
65.65
45.1

Associated Gene:

Gene:
VWF

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

76675951 - 76824914
148964

76675951 - 76824887
148937