Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_76696463_76698645_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76696463 - 76698645

Intron Length:

2183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

GTAATTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTCTTGTAATT

Flanking Amino Acid:

LDGWPEESLCRPRCPVGMEY

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.61

69.1

38.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

73.3

0.53

69.5

45.7

Minor 5ss

41.8

-0.9

2.8

54.8

43.5

Minor BPS

57.5

0.31

80.3

36.2

Associated Gene:

Gene:

VWF

Ensembl Gene ID:

ENSAPLG00000002805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002949

76675951 - 76824887

148937

ENSAPLT00000045676

76675951 - 76824914

148964