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Intron Name: Anas_platyrhynchos_platyrhynchos_1_76766363_76767320_F


Intron Information:

Intron Rank:
30

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
76766363 - 76767320

Intron Length:
958

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACA|GTAAATCTC

5'SS Class:
major

3'SS Sequence:
TCTCTTTTCCTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CATTTAT

U12 Branch Point Sequence:
ACCCATTTAAGA

Flanking Amino Acid:
ETAALAARMNRVSLFPIGVG

Intron Amino Acid Position:
1808

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.9
0.4
1.1
63.6
41.1

Major BPS
76.3
0.65
1
67.3
39.3

Major PPT
82.2
0.72
0.7
76.4
32.2

Minor 5ss
40.3
-1.1
3.1
58.7
39.9

Minor BPS
46.5
-0.2
1.8
51.53
40.4

Associated Gene:

Gene:
VWF

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

76675951 - 76824914
148964

76675951 - 76824887
148937