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Intron Name: Anas_platyrhynchos_platyrhynchos_1_7679013_7682363_R

Intron Information:

Intron Rank:

136408

Intron Class:

major

Intron Phase:

Intron Coordinates:

7679013 - 7682363

Intron Length:

3351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCACC

5'SS Class:

major

3'SS Sequence:

TTTCTTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TTTCTTTTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

69.7

41.3

Major BPS

74.5

0.61

79.6

29.1

Major PPT

90.8

0.92

0.6

87.1

23.5

Minor 5ss

39.3

-1.2

3.1

52.3

44.6

Minor BPS

61.7

0.36

1.7

75.92

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020820

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035772

7643938 - 7682670

38733