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Intron Name: Anas_platyrhynchos_platyrhynchos_1_76997332_77006877_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

76997332 - 77006877

Intron Length:

9546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTATCCCAG

5'SS Class:

weak_minor

3'SS Sequence:

GTTCCTCAGGAAG|T

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

TCCAGTCTAACT

Flanking Amino Acid:

NNLFEIGIPYLKKLFRKLKD

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.2

0.08

1.3

45.4

44.2

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

54.6

0.1

1.2

57.1

Minor 5ss

54.5

0.15

2.5

68.6

42.6

Minor BPS

46.4

-0.1

2.1

64.65

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002960

76884760 - 77025362

140603