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Intron Name: Anas_platyrhynchos_platyrhynchos_1_7716731_7716907_F

Intron Information:

Intron Rank:

130783

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7716731 - 7716907

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGATCCTC

5'SS Class:

major

3'SS Sequence:

TTCTGAAAAGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

CATTTCTGAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

65.1

Major BPS

82.1

0.8

71.6

36.4

Major PPT

50.4

0.01

1.2

51.7

40.1

Minor 5ss

37.1

-1.5

3.2

50.6

45.9

Minor BPS

58.4

0.26

1.6

66.53

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020215

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032081

7710003 - 7718819

8817

ENSAPLT00000032266

7709334 - 7718819

9486