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Intron Name: Anas_platyrhynchos_platyrhynchos_1_773044_774081_F

Intron Information:

Intron Rank:

131123

Intron Class:

major

Intron Phase:

Intron Coordinates:

773044 - 774081

Intron Length:

1038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCTCCAG

5'SS Class:

major

3'SS Sequence:

TTTTTATCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTTTTTATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.6

0.3

1.1

48.8

43.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.9

0.83

0.7

85.8

27.5

Minor 5ss

30.8

-2.2

3.2

38.3

46.7

Minor BPS

64.5

0.44

1.6

73.08

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024011

773025 - 775434

2410