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Intron Name: Anas_platyrhynchos_platyrhynchos_1_77396679_77398139_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
77396679 - 77398139

Intron Length:
1461

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTAATGTAG

5'SS Class:
major

3'SS Sequence:
TTTTCTTGCAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTAAAT

U12 Branch Point Sequence:
TTTTCTTGCAAA

Flanking Amino Acid:
SLEKTNIKAKRHLIPSISCC

Intron Amino Acid Position:
710

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.8
0.44
1.1
62.2
38.9

Major BPS
82.3
0.8
0.9
87.6
25.7

Major PPT
71.5
0.48
1.1
74.3
34.3

Minor 5ss
37.9
-1.4
3.3
46.7
43.2

Minor BPS
52.4
0.07
2
73.41
38.3

Associated Gene:

Gene:
KCNA5

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

77396596 - 77400267
3672