Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_774115_775209_F

Intron Information:

Intron Rank:

131124

Intron Class:

major

Intron Phase:

Intron Coordinates:

774115 - 775209

Intron Length:

1095

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTACACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGACAT

U12 Branch Point Sequence:

TCTTTCTACACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

71.6

40.2

Major BPS

58.8

0.22

1.2

66.8

39.9

Major PPT

80.6

0.69

0.8

76.4

31.2

Minor 5ss

34.1

-1.8

2.8

34.5

Minor BPS

53.3

0.1

2.1

70.02

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024011

773025 - 775434

2410