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Intron Name: Anas_platyrhynchos_platyrhynchos_1_77415677_77417289_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

77415677 - 77417289

Intron Length:

1613

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

GATTTCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CTCATTTTGATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.7

44.5

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

82.6

0.73

0.9

73.6

41.5

Minor 5ss

37.4

-1.4

42.1

44.4

Minor BPS

54.5

0.22

1.3

66.05

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002935

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002968

77408728 - 77417830

9103