Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_77674171_77684152_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

77674171 - 77684152

Intron Length:

9982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CATTTTCAATCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TCATTTTCAATC

Flanking Amino Acid:

DRLDWNIYNLSKSLEKVHKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

85.3

25.4

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

71.9

0.49

71.5

38.2

Minor 5ss

37.5

-1.4

2.8

46.9

41.8

Minor BPS

56.2

0.17

1.5

62.42

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002981

77651216 - 77684444

33229