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Intron Name: Anas_platyrhynchos_platyrhynchos_1_77700119_77704311_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

77700119 - 77704311

Intron Length:

4193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTTAC

5'SS Class:

major

3'SS Sequence:

CTCTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

CCTAATTTAACT

Flanking Amino Acid:

DAKGKTYALAGPNRYLLHDL

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

69.3

38.5

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

89.5

0.89

0.6

87.9

22.1

Minor 5ss

38.7

-1.3

3.1

43.2

44.5

Minor BPS

60.8

0.42

1.6

73.22

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047794

77672117 - 77713909

41793

ENSAPLT00000003035

77672117 - 77711690

39574