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Intron Name: Anas_platyrhynchos_platyrhynchos_1_77704389_77704534_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

77704389 - 77704534

Intron Length:

146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TGTTGGTAAATA

Flanking Amino Acid:

GKKTAKQPIYVVDVAKAIIN

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

89.9

23.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

84.7

0.78

0.8

80.1

Minor 5ss

48.6

-0.1

2.8

71.8

38.1

Minor BPS

44.6

-0.4

2.6

63.35

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047794

77672117 - 77713909

41793

ENSAPLT00000003035

77672117 - 77711690

39574