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Intron Name: Anas_platyrhynchos_platyrhynchos_1_77705253_77706298_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

77705253 - 77706298

Intron Length:

1046

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

TAATTAATGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

ATCACTTTAATT

Flanking Amino Acid:

KSPSKYLRNKAVGEKAVREE

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.8

33.6

Major BPS

0.82

0.8

24.9

Major PPT

64.5

0.33

1.1

59.3

44.8

Minor 5ss

39.5

-1.2

50.5

Minor BPS

70.6

0.72

1.2

78.71

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047794

77672117 - 77713909

41793

ENSAPLT00000003035

77672117 - 77711690

39574