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Intron Name: Anas_platyrhynchos_platyrhynchos_1_7775564_7780812_R

Intron Information:

Intron Rank:

135179

Intron Class:

major

Intron Phase:

Intron Coordinates:

7775564 - 7780812

Intron Length:

5249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGGTAA

U12 Branch Point Sequence:

TTTTTCTGAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

85.2

32.2

Major BPS

39.4

-0.6

1.3

26.9

35.1

Major PPT

74.8

0.56

1.1

78.9

33.6

Minor 5ss

37.2

-1.4

3.6

57.3

47.4

Minor BPS

66.1

0.37

1.6

73.47

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043655

7772491 - 7781023

8533