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Intron Name: Anas_platyrhynchos_platyrhynchos_1_77885668_77887170_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

77885668 - 77887170

Intron Length:

1503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTCGTATT

5'SS Class:

major

3'SS Sequence:

TCCTTGCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCCCAT

U12 Branch Point Sequence:

CCCTCCCCACTC

Flanking Amino Acid:

RRMVATWMLEVCEEQKCEEE

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.2

83.1

35.7

Major BPS

59.9

0.25

1.3

70.1

Major PPT

82.1

0.72

0.8

76.2

32.4

Minor 5ss

-1.5

44.5

Minor BPS

41.2

-0.6

46.38

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003009

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031527

77884376 - 77921349

36974

ENSAPLT00000003051

77884376 - 77921841

37466