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Intron Name: Anas_platyrhynchos_platyrhynchos_1_77890216_77901577_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

77890216 - 77901577

Intron Length:

11362

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGCCAA

5'SS Class:

major

3'SS Sequence:

TCTGTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTAAT

U12 Branch Point Sequence:

ATTCCCAGATCT

Flanking Amino Acid:

AQTFIALCATDFNFAMYPPS

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.68

1.1

65.2

42.4

Major BPS

0.47

1.2

69.9

35.3

Major PPT

0.81

0.8

80.6

31.4

Minor 5ss

36.1

-1.6

3.2

47.1

48.3

Minor BPS

48.7

-0

74.51

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003009

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031527

77884376 - 77921349

36974

ENSAPLT00000003051

77884376 - 77921841

37466