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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_77958964_77961799_R

Intron Information:

Intron Rank:
3
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
77958964 - 77961799
Intron Length:
2836

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTATGCGAG
5'SS Class:
major
3'SS Sequence:
TTCTTTCTCTCAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTATAAA
U12 Branch Point Sequence:
CTTTTATAAAAT
Flanking Amino Acid:
DDPHAMMDARRVVDFALFVQ
Intron Amino Acid Position:
244

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.9
0.71
1
64.9
41.2
Major BPS
78.6
0.71
1
78.6
31
Major PPT
88.8
0.87
0.6
88.2
21.6
Minor 5ss
41.8
-0.9
3.2
54.5
49.7
Minor BPS
49.7
0.06
2
73.71
43.1

Associated Gene:

Gene:
FGF23
Ensembl Gene ID:
ENSAPLG00000003044
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000003082
77958882 - 77965108
6227