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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_77962746_77964885_R

Intron Information:

Intron Rank:
1
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
77962746 - 77964885
Intron Length:
2140

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ACA|GTAAGTAGC
5'SS Class:
major
3'SS Sequence:
TTTTCTTAAACAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTCTTAA
U12 Branch Point Sequence:
TTTTCTTAAACA
Flanking Amino Acid:
IDGVPHQTIYSALMIKSEGA
Intron Amino Acid Position:
75

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
76.3
0.62
1
70.3
40.5
Major BPS
82.2
0.8
0.8
71.9
35.8
Major PPT
80.3
0.68
0.9
78
34.2
Minor 5ss
38.3
-1.3
2.8
51.5
39
Minor BPS
76.8
0.84
1.5
86.93
31.8

Associated Gene:

Gene:
FGF23
Ensembl Gene ID:
ENSAPLG00000003044
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000003082
77958882 - 77965108
6227